AnnDictionary

AnnDictionary utility functions.

Some utility functions for string processing

enforce_semantic_list(lst)	This function runs a number of checks to make sure that the input is a semantic list, and not i.e. integers cast as strings.
make_names(names)	Convert a list of names into valid and unique Python identifiers.
normalize_string(s)	Removes non-alphanumeric characters and converts to lowercase.
normalize_label(label)	Calls normalize-string and handles NaN values.

Metadata summary functions

summarize_metadata(adata, cols)	Generate a summary for specified metadata column(s) in adata.
display_html_summary(summary_dict[, return_html])	Display separate HTML tables for each metadata category in the summary dictionary, arranging up to three tables in a row before starting a new line.

Miscellaneous

create_color_map(adata, keys)	Creates a unified color map for given keys from an AnnData object, differentiating between continuous and categorical data.
get_slurm_cores()	Returns the total number of CPU cores allocated to a Slurm job based on environment variables.